Full information on isolate ERR460148 (id:7101)

Provenance/primary metadata

id
7101
isolate
ERR460148
subspecies
enterica
serovar
Paratyphi BIII
ENA accession
ERR460148 www.ebi.ac.uk
rMLST database accession
97273
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
12 updates show details
date entered
2015-05-14
datestamp
2016-09-21

Sequence bin

contigs
117
total length
4,652,371 bp
max length
342,973 bp
mean length
39,764 bp
N50 contig number
12
N50 length (L50)
119,693
N90 contig number
39
N90 length (L90)
44,893
N95 contig number
46
N95 length (L95)
23,620
loci tagged
6,576

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 195 (25 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 258 (24 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 350 (22 isolates)

Schemes and loci

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