Full information on isolate ERR460145 (id:7099)

Provenance/primary metadata

id
7099
isolate
ERR460145
subspecies
enterica
serovar
Paratyphi BIII
ENA accession
ERR460145 www.ebi.ac.uk
rMLST database accession
97271
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
9 updates show details
date entered
2015-05-14
datestamp
2019-06-05

Sequence bin

contigs
144
total length
4,771,126 bp
max length
342,974 bp
mean length
33,133 bp
N50 contig number
16
N50 length (L50)
88,939
N90 contig number
49
N90 length (L90)
32,581
N95 contig number
57
N95 length (L95)
22,425
loci tagged
6,530

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 195 (25 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 258 (24 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 350 (22 isolates)

Schemes and loci

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Tools

Analysis: