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Full information on isolate Ty2 (id:4)

Provenance/meta data

id
4
isolate
Ty2
aliases
AE014613; NC_004631; PRJNA371; PRJNA57973
subspecies
enterica
serovar
Typhi
ENA accession
AE014613 www.ebi.ac.uk
rMLST database accession
73
sender
Maddi Pearce, University of Oxford, UK
curator
Auto Tagger
update history
14 updates show details
date entered
2014-11-11
datestamp
2018-12-05

Publication (1)

  • Deng W, Liou SR, Plunkett G, Mayhew GF, Rose DJ, Burland V, Kodoyianni V, Schwartz DC, Blattner FR (2003). Comparative genomics of Salmonella enterica serovar Typhi strains Ty2 and CT18. J Bacteriol 185:2330-7

Sequence bin

contigs
1
length
4791961 bp
loci tagged
6,376
detailed breakdown
Display

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 2 (3000 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 4 (2586 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 4 (3 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 4 (3 isolates)

Schemes and loci

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