PubMLST Database home Contents
Log in
Help

Full information on isolate SC-B67 (id:3)

Provenance/meta data

id
3
isolate
SC-B67
aliases
AE017220; NC_006905; PRJNA58017; PRJNA9618
subspecies
enterica
serovar
Choleraesuis
source
clinical
detailed source
human
ENA accession
AE017220 www.ebi.ac.uk
rMLST database accession
72
sender
Maddi Pearce, University of Oxford, UK
curator
Auto Tagger
update history
13 updates show details
date entered
2014-11-11
datestamp
2018-12-05

Publication (1)

  • Chiu CH, Tang P, Chu C, Hu S, Bao Q, Yu J, Chou YY, Wang HS, Lee YS (2005). The genome sequence of Salmonella enterica serovar Choleraesuis, a highly invasive and resistant zoonotic pathogen. Nucleic Acids Res 33:1690-8

Sequence bin

contigs
1
length
4755700 bp
loci tagged
6,413
detailed breakdown
Display

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 66 (25 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 3 (2 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 3 (2 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 3 (2 isolates)

Schemes and loci

Navigate and select schemes within tree to display allele designations

Tools

Analysis: