Full information on isolate H124100717 (id:2276)

Provenance/primary metadata

id
2276
isolate
H124100717
subspecies
enterica
serovar
Paratyphi BIII
ENA accession
ERR024380 www.ebi.ac.uk
rMLST database accession
36576
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
11 updates show details
date entered
2014-11-21
datestamp
2016-09-20

Sequence bin

contigs
131
total length
4,858,204 bp
max length
570,771 bp
mean length
37,086 bp
N50 contig number
6
N50 length (L50)
301,661
N90 contig number
25
N90 length (L90)
55,131
N95 contig number
30
N95 length (L95)
35,977
loci tagged
6,530

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 195 (25 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 258 (24 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 350 (22 isolates)

Schemes and loci

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