Full information on isolate ERR278737 (id:1352)

Provenance/primary metadata

id
1352
isolate
ERR278737
alias
ERR278737
subspecies
enterica
serovar
Paratyphi BIII
ENA accession
ERR235200 www.ebi.ac.uk
rMLST database accession
35288
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
11 updates show details
date entered
2014-11-21
datestamp
2016-09-20

Sequence bin

contigs
70
total length
4,697,249 bp
max length
420,139 bp
mean length
67,104 bp
N50 contig number
8
N50 length (L50)
230,122
N90 contig number
24
N90 length (L90)
56,369
N95 contig number
28
N95 length (L95)
45,967
loci tagged
6,585

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 195 (25 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 258 (24 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 350 (22 isolates)

Schemes and loci

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