Full information on isolate SRR1481668_Enterobase (id:13292)

Provenance/primary metadata

id
13292
isolate
SRR1481668_Enterobase
alias
FCC0148
subspecies
enterica
serovar
Paratyphi B
comments
Enterobase entry.
ENA accession
SRR1481668 www.ebi.ac.uk
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
5 updates show details
date entered
2016-07-15
datestamp
2016-09-22

Sequence bin

contigs
51
total length
4,711,544 bp
max length
572,407 bp
mean length
92,384 bp
N50 contig number
6
N50 length (L50)
244,677
N90 contig number
20
N90 length (L90)
77,361
N95 contig number
23
N95 length (L95)
51,744
loci tagged
6,557

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 195 (25 isolates)

Schemes and loci

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