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Full information on isolate ERR278709 (id:1324)

Provenance/primary metadata

id
1324
isolate
ERR278709
alias
ERR278709
subspecies
enterica
serovar
Paratyphi BIII
ENA accession
ERR235383
rMLST database accession
35254
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
11 updates show details
date entered
2014-11-21
datestamp
2016-09-20

Sequence bin

contigs
105
total length
4,796,396 bp
max length
403,815 bp
mean length
45,680 bp
N50 contig number
10
N50 length (L50)
155,282
N90 contig number
36
N90 length (L90)
34,212
N95 contig number
45
N95 length (L95)
20,996
loci tagged
6,572
detailed breakdown
Display

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 188 (3 isolates)

Schemes and loci

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Analysis: