Full information on isolate ERR403712_Enterobase (id:13190)

Provenance/primary metadata

id
13190
isolate
ERR403712_Enterobase
alias
dT+
subspecies
enterica
serovar
Paratyphi B
comments
Enterobase entry.
ENA accession
ERR403712 www.ebi.ac.uk
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
5 updates show details
date entered
2016-07-15
datestamp
2016-09-22

Sequence bin

contigs
36
total length
4,725,730 bp
max length
624,662 bp
mean length
131,271 bp
N50 contig number
5
N50 length (L50)
397,491
N90 contig number
14
N90 length (L90)
91,715
N95 contig number
17
N95 length (L95)
57,045
loci tagged
6,599

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 195 (25 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 258 (24 isolates)
Salm_cgc_25SalmcgMLST v1.0Single-linkage25experimentalgroup: 350 (22 isolates)

Schemes and loci

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Tools

Analysis: