Full information on isolate SRR1959480_Enterobase (id:12021)

Provenance/primary metadata

id
12021
isolate
SRR1959480_Enterobase
alias
69708
subspecies
enterica
serovar
Java
comments
Enterobase entry.
ENA accession
SRR1959480 www.ebi.ac.uk
sender
Maddi Pearce, University of Oxford, UK
curator
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update history
5 updates show details
date entered
2016-07-15
datestamp
2016-09-22

Sequence bin

contigs
52
total length
4,796,514 bp
max length
629,092 bp
mean length
92,241 bp
N50 contig number
7
N50 length (L50)
232,784
N90 contig number
25
N90 length (L90)
59,266
N95 contig number
29
N95 length (L95)
44,629
loci tagged
6,552

Show sequence bin

Similar isolates (determined by classification schemes)

Experimental schemes are subject to change and are not a stable part of the nomenclature.

Classification schemeUnderlying schemeClustering methodMismatch thresholdStatusGroup
Salm_cgc_200SalmcgMLST v1.0Single-linkage200experimentalgroup: 1 (54 isolates)
Salm_cgc_100SalmcgMLST v1.0Single-linkage100experimentalgroup: 185 (9 isolates)
Salm_cgc_50SalmcgMLST v1.0Single-linkage50experimentalgroup: 1596 (2 isolates)

Schemes and loci

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