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Full information on isolate SA20-06 (id:184)

Provenance/primary metadata

id
184
isolate
SA20-06
country
Brazil
continent
South America
year
2006
capsular serotype
Ib
capsular genotype
Ib
sender
Henrique Figueiredo, Aquavet - Federal University of Minas Gerais, Belo Horizonte - Brazil
curator
Odile Harrison, University of Oxford, UK (E-mail: odile.harrison@zoo.ox.ac.uk)
update history
14 updates show details
date entered
2011-05-31
datestamp
2021-07-23

Publication (1)

  • Gori A, Harrison OB, Mlia E, Nishihara Y, Chan JM, Msefula J, Mallewa M, Dube Q, Swarthout TD, Nobbs AH, Maiden MCJ, French N, Heyderman RS (2020). Pan-GWAS of Streptococcus agalactiae Highlights Lineage-Specific Genes Associated with Virulence and Niche Adaptation. mBio 11:

Sequence bin

contigs
1
length
1,820,886 bp
%GC
35.56
Ns
0
gaps
0
loci tagged
1,483

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
h_S.agalactiae cgMLST v1.01405121986

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Streptococcus agalactiae Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus agalactiae 98%

Analysis performed: 2023-03-15

Schemes and loci

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