Full information on isolate R-23 (id:272)

Provenance/primary metadata

id
272
isolate
R-23
country
China
continent
Asia
region
Shandong
year
2021
source
meninges
epidemiology
epidemic
sender
xihui zhu, liaocheng university
curator
Keith Jolley, University of Oxford, UK (E-mail: keith.jolley@biology.ox.ac.uk)
update history
2 updates show details
date entered
2022-07-21
datestamp
2022-07-21

Sequence bin

contigs
158
total length
2,266,488 bp
max length
286,070 bp
mean length
14,345 bp
N50
78,095
L50
9
N90
19,949
L90
31
N95
8,993
L95
39
%GC
34.93
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Riemerella anatipestifer Bacteroidetes > Flavobacteriia > Flavobacteriales > Weeksellaceae > Riemerella > Riemerella anatipestifer 100%

Analysis performed: 2022-07-21

Schemes and loci

MLST

dnaB
6  S 
groEL
6  S 
gyrA
15  S 
mdh
26  S 
gluD
8  S 
gpi
15  S 
rpoB
18  S 
ST
96
clonal complex
Not defined

Tools

Export:
Analysis: