Full information on isolate R-14 (id:266)

Provenance/primary metadata

id
266
isolate
R-14
country
China
continent
Asia
region
Hebei
year
2021
source
meninges
epidemiology
epidemic
sender
xihui zhu, liaocheng university
curator
Keith Jolley, University of Oxford, UK (E-mail: keith.jolley@biology.ox.ac.uk)
update history
2 updates show details
date entered
2022-07-21
datestamp
2022-07-21

Sequence bin

contigs
531
total length
2,633,156 bp
max length
664,099 bp
mean length
4,959 bp
N50
181,614
L50
4
N90
1,335
L90
135
N95
740
L95
264
%GC
34.71
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Riemerella anatipestifer Bacteroidetes > Flavobacteriia > Flavobacteriales > Weeksellaceae > Riemerella > Riemerella anatipestifer 100%

Analysis performed: 2022-07-21

Schemes and loci

MLST

dnaB
2  S 
groEL
1  S 
gyrA
1  S 
mdh
1  S 
gluD
1  S 
gpi
2  S 
rpoB
7  S 
ST
4
clonal complex
Not defined

Tools

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