Full information on isolate R-9 (id:261)

Provenance/primary metadata

id
261
isolate
R-9
country
China
continent
Asia
region
Shandong
year
2021
source
meninges
epidemiology
epidemic
sender
xihui zhu, liaocheng university
curator
Keith Jolley, University of Oxford, UK (E-mail: keith.jolley@biology.ox.ac.uk)
update history
2 updates show details
date entered
2022-07-21
datestamp
2022-07-21

Sequence bin

contigs
58
total length
2,172,010 bp
max length
369,181 bp
mean length
37,449 bp
N50
209,368
L50
4
N90
47,468
L90
12
N95
22,748
L95
15
%GC
34.95
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Riemerella anatipestifer Bacteroidetes > Flavobacteriia > Flavobacteriales > Weeksellaceae > Riemerella > Riemerella anatipestifer 100%

Analysis performed: 2022-07-21

Schemes and loci

MLST

dnaB
2  S 
groEL
1  S 
gyrA
1  S 
mdh
1  S 
gluD
1  S 
gpi
24  S 
rpoB
7  S 
ST
98
clonal complex
Not defined

Tools

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