Full information on isolate R-7 (id:259)

Provenance/primary metadata

id
259
isolate
R-7
country
China
continent
Asia
region
Shandong
year
2021
source
meninges
epidemiology
epidemic
sender
xihui zhu, liaocheng university
curator
Keith Jolley, University of Oxford, UK (E-mail: keith.jolley@biology.ox.ac.uk)
update history
3 updates show details
date entered
2022-07-21
datestamp
2022-07-21

Sequence bin

contigs
133
total length
2,223,208 bp
max length
174,488 bp
mean length
16,716 bp
N50
103,942
L50
9
N90
25,659
L90
25
N95
7,944
L95
32
%GC
34.99
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Riemerella anatipestifer Bacteroidetes > Flavobacteriia > Flavobacteriales > Weeksellaceae > Riemerella > Riemerella anatipestifer 100%

Analysis performed: 2022-07-21

Schemes and loci

MLST

dnaB
6  S 
groEL
6  S 
gyrA
15  S 
mdh
26  S 
gluD
8  S 
gpi
16  S 
rpoB
18  S 
ST
97
clonal complex
Not defined

Tools

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