Full information on isolate 19120523 (id:1620)

Provenance/primary metadata

id
1620
isolate
19120523
country
Australia
continent
Oceania
year
2017
host
porcine
sender
Alec Truswell, Murdoch University
curator
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update history
9 updates show details
date entered
2021-01-06
datestamp
2021-01-07

Sequence bin

contigs
146
total length
2,366,239 bp
max length
137,322 bp
mean length
16,208 bp
N50
49,815
L50
15
N90
12,340
L90
54
N95
9,237
L95
65
%GC
40.21
Ns
0
gaps
0
loci tagged
6

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Pasteurella multocida Proteobacteria > Gammaproteobacteria > Pasteurellales > Pasteurellaceae > Pasteurella > Pasteurella multocida 100%

Analysis performed: 2022-12-07

Schemes and loci

Multi host MLST

mhadk
4  S 
mharoA
4  S 
mhdeoD
4  S 
mhgdhA
5  S 
mhg6pd (zwf)
4  S 
mhmdh
 
mhpgi
4  S 
ST
Not defined
clonal complex
Not defined

Tools

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