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Full information on isolate BCGTokyo172 (id:21)

Provenance/primary metadata

id
21
isolate
BCGTokyo172
aliases
AP010918; NC_012207; PRJDA31211; PRJNA59281
country
Japan
continent
Asia
species
Mycobacterium bovis
genome status
finished
data source
NCBI reference
ENA accession
AP010918 www.ebi.ac.uk
rMLST database accession
767
comments
one of the daughter strains of BCG used for vaccine production (others are Danish, Glaxo, Pasteur, Moreau, Tokyo, and Russia)
sender
Sofia Hauck
curator
Sofia Hauck, University of Oxford, UK (E-mail: sofia.hauck@zoo.ox.ac.uk)
update history
53 updates show details
date entered
2014-12-12
datestamp
2017-08-24

Publication (1)

  • Seki M, Honda I, Fujita I, Yano I, Yamamoto S, Koyama A (2009). Whole genome sequence analysis of Mycobacterium bovis bacillus Calmette-GuĂ©rin (BCG) Tokyo 172: a comparative study of BCG vaccine substrains. Vaccine 27:1710-6

Sequence bin

contigs
1
length
4,371,711 bp
%GC
65.64
Ns
0
gaps
0
loci tagged
3,702

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mycobacterium tuberculosis Actinomycetota > Actinomycetes > Corynebacteriales > Mycobacteriaceae > Mycobacterium > Mycobacterium tuberculosis 100%

Analysis performed: 2023-03-10

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