Full information on isolate K-10 (id:18)

Provenance/primary metadata

id
18
isolate
K-10
aliases
AE016958; NC_002944; PRJNA57699; PRJNA91
country
USA
continent
North America
species
Mycobacterium avium
year
1970
genome status
finished
data source
NCBI reference
ENA accession
AE016958 www.ebi.ac.uk
rMLST database accession
764
comments
Causative agent of Johne's disease, or paratuberculosis, a chronic severe intestinal infection; source: dairy herd; paratuberculosis
sender
Sofia Hauck
curator
Sofia Hauck, University of Oxford, UK (E-mail: sofia.hauck@zoo.ox.ac.uk)
update history
28 updates show details
date entered
2014-12-12
datestamp
2017-07-27

Publication (1)

  • Li L, Bannantine JP, Zhang Q, Amonsin A, May BJ, Alt D, Banerji N, Kanjilal S, Kapur V (2005). The complete genome sequence of Mycobacterium avium subspecies paratuberculosis. Proc Natl Acad Sci U S A 102:12344-9

Sequence bin

contigs
1
length
4,829,781 bp
%GC
69.30
Ns
0
gaps
0
loci tagged
1,060

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mycobacterium avium Actinomycetota > Actinomycetes > Corynebacteriales > Mycobacteriaceae > Mycobacterium > Mycobacterium avium 100%

Analysis performed: 2023-03-10

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