Full information on isolate 104 (id:17)

Provenance/primary metadata

id
17
isolate
104
aliases
CP000479; NC_008595; PRJNA57693; PRJNA88
country
USA
continent
North America
species
Mycobacterium avium
year
1983
genome status
finished
data source
NCBI reference
ENA accession
CP000479 www.ebi.ac.uk
rMLST database accession
763
comments
AIDS patient
sender
Sofia Hauck
curator
Sofia Hauck, University of Oxford, UK (E-mail: sofia.hauck@zoo.ox.ac.uk)
update history
30 updates show details
date entered
2014-12-12
datestamp
2017-07-27

Publication (1)

  • Horan KL, Freeman R, Weigel K, Semret M, Pfaller S, Covert TC, van Soolingen D, Leão SC, Behr MA, Cangelosi GA (2006). Isolation of the genome sequence strain Mycobacterium avium 104 from multiple patients over a 17-year period. J Clin Microbiol 44:783-9

Sequence bin

contigs
1
length
5,475,491 bp
%GC
68.99
Ns
0
gaps
0
loci tagged
1,069

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mycobacterium avium Actinomycetota > Actinomycetes > Corynebacteriales > Mycobacteriaceae > Mycobacterium > Mycobacterium avium 100%

Analysis performed: 2023-03-10

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