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Full information on isolate Agy99 (id:15)

Provenance/primary metadata

id
15
isolate
Agy99
aliases
CP000325; NC_008611; PRJNA16230; PRJNA62939
country
Ghana
continent
Africa
species
Mycobacterium ulcerans
year
1999
genome status
finished
data source
NCBI reference
ENA accession
CP000325 www.ebi.ac.uk
rMLST database accession
145
comments
environmental, aquatic ecosystems; human pathogen
sender
Sofia Hauck, University of Oxford, UK
curator
Auto Tagger
update history
28 updates show details
date entered
2014-12-12
datestamp
2022-06-29

Publication (1)

  • Stinear TP, Seemann T, Pidot S, Frigui W, Reysset G, Garnier T, Meurice G, Simon D, Bouchier C, Ma L, Tichit M, Porter JL, Ryan J, Johnson PD, Davies JK, Jenkin GA, Small PL, Jones LM, Tekaia F, Laval F, DaffĂ© M, Parkhill J, Cole ST (2007). Reductive evolution and niche adaptation inferred from the genome of Mycobacterium ulcerans, the causative agent of Buruli ulcer. Genome Res 17:192-200

Sequence bin

contigs
1
length
5,631,606 bp
%GC
65.47
Ns
0
gaps
0
loci tagged
1,022

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Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mycobacterium ulcerans Actinobacteria > Actinomycetia > Corynebacteriales > Mycobacteriaceae > Mycobacterium > Mycobacterium ulcerans 100%

Analysis performed: 2022-10-26

Schemes and loci

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