Full information on isolate NS44 (id:99)

Provenance/primary metadata

id
99
isolate
NS44
aliases
GCA_001477405.1; LDTO01
country
India
continent
Asia
year
2013
disease
unknown
source
food
detailed source
Oryza sativa
bioproject accession
PRJNA278419 www.ebi.ac.uk
biosample accession
SAMN03401366 www.ebi.ac.uk
rMLST database accession
186716
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
164
total length
2,979,501 bp
max length
394,406 bp
mean length
18,168 bp
N50
142,946
L50
7
N90
36,616
L90
21
N95
13,599
L95
28
%GC
33.32
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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