Full information on isolate NS36 (id:98)

Provenance/primary metadata

id
98
isolate
NS36
aliases
GCA_001477335.1; LDTN01
country
India
continent
Asia
year
2013
disease
unknown
source
food
detailed source
Oryza sativa
bioproject accession
PRJNA278417 www.ebi.ac.uk
biosample accession
SAMN03401357 www.ebi.ac.uk
rMLST database accession
186715
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
117
total length
2,881,302 bp
max length
161,575 bp
mean length
24,627 bp
N50
52,335
L50
15
N90
13,921
L90
56
N95
8,555
L95
67
%GC
32.37
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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