Full information on isolate NS202 (id:97)

Provenance/primary metadata

id
97
isolate
NS202
aliases
GCA_001476555.1; LDTM01
country
India
continent
Asia
year
2013
disease
unknown
source
food
detailed source
Oryza sativa
bioproject accession
PRJNA278195 www.ebi.ac.uk
biosample accession
SAMN03401359 www.ebi.ac.uk
rMLST database accession
186714
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
56
total length
2,743,697 bp
max length
211,621 bp
mean length
48,995 bp
N50
93,562
L50
10
N90
27,847
L90
33
N95
17,503
L95
39
%GC
32.43
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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