Full information on isolate NS112 (id:96)

Provenance/primary metadata

id
96
isolate
NS112
aliases
GCA_001477395.1; LDTL01
country
India
continent
Asia
year
2013
disease
unknown
source
food
detailed source
Oryza sativa
bioproject accession
PRJNA278196 www.ebi.ac.uk
biosample accession
SAMN03401360 www.ebi.ac.uk
rMLST database accession
186713
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
136
total length
2,878,573 bp
max length
178,384 bp
mean length
21,166 bp
N50
49,833
L50
18
N90
12,802
L90
64
N95
7,846
L95
79
%GC
32.37
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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