Full information on isolate BMSA 1 (id:94)

Provenance/primary metadata

id
94
isolate
BMSA 1
aliases
GCA_001051265.1; LFXB01
country
India
continent
Asia
year
2015
disease
unknown
detailed disease
clinical mastitis
source
animal
detailed source
Bos taurus, milk sample
bioproject accession
PRJNA288632 www.ebi.ac.uk
biosample accession
SAMN03835273; SRS977015 www.ebi.ac.uk
rMLST database accession
183926
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
87
total length
2,838,583 bp
max length
937,569 bp
mean length
32,628 bp
N50
644,842
L50
2
N90
71,189
L90
9
N95
38,976
L95
11
%GC
32.53
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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