Full information on isolate SNUC 4659 (id:115)

Provenance/primary metadata

id
115
isolate
SNUC 4659
aliases
GCA_003042135.1; PZGW01
country
Canada
continent
North America
region
Ontario
year
2007
sex
female
disease
mastitis
source
animal
detailed source
Bos taurus, herd 225
bioproject accession
PRJNA342349 www.ebi.ac.uk
biosample accession
SAMN06173140 www.ebi.ac.uk
rMLST database accession
287947
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
8 updates show details
date entered
2020-11-13
datestamp
2021-02-12

Sequence bin

contigs
383
total length
2,745,430 bp
max length
69,032 bp
mean length
7,169 bp
N50
14,604
L50
54
N90
3,397
L90
195
N95
2,086
L95
244
%GC
32.56
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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