Full information on isolate SNUC 1403 (id:114)

Provenance/primary metadata

id
114
isolate
SNUC 1403
aliases
GCA_003041945.1; PZHB01
country
Canada
continent
North America
region
Atlantic
year
2007
sex
female
disease
mastitis
source
animal
detailed source
Bos taurus, herd 416
bioproject accession
PRJNA342349 www.ebi.ac.uk
biosample accession
SAMN06173128 www.ebi.ac.uk
rMLST database accession
287945
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
8 updates show details
date entered
2020-11-13
datestamp
2021-02-12

Sequence bin

contigs
157
total length
2,617,883 bp
max length
147,174 bp
mean length
16,675 bp
N50
40,224
L50
20
N90
9,645
L90
66
N95
6,466
L95
82
%GC
32.48
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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