Full information on isolate SNUC 70 (id:113)

Provenance/primary metadata

id
113
isolate
SNUC 70
aliases
GCA_003041935.1; PZHH01
country
Canada
continent
North America
region
Alberta
year
2007
sex
female
disease
mastitis
source
animal
detailed source
Bos taurus, herd 102
bioproject accession
PRJNA342349 www.ebi.ac.uk
biosample accession
SAMN06173114 www.ebi.ac.uk
rMLST database accession
287944
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
8 updates show details
date entered
2020-11-13
datestamp
2021-02-12

Sequence bin

contigs
180
total length
2,836,376 bp
max length
109,870 bp
mean length
15,758 bp
N50
43,475
L50
23
N90
11,064
L90
74
N95
4,588
L95
93
%GC
32.52
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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