Full information on isolate SNUC 3899 (id:111)

Provenance/primary metadata

id
111
isolate
SNUC 3899
aliases
GCA_003041895.1; PZGY01
country
Canada
continent
North America
region
Ontario
year
2007
sex
female
disease
mastitis
source
animal
detailed source
Bos taurus, herd 209
bioproject accession
PRJNA342349 www.ebi.ac.uk
biosample accession
SAMN06173138 www.ebi.ac.uk
rMLST database accession
287942
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
8 updates show details
date entered
2020-11-13
datestamp
2021-02-12

Sequence bin

contigs
165
total length
2,764,091 bp
max length
126,582 bp
mean length
16,753 bp
N50
34,773
L50
24
N90
9,166
L90
82
N95
5,870
L95
102
%GC
32.56
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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