Full information on isolate SNUC 4210 (id:110)

Provenance/primary metadata

id
110
isolate
SNUC 4210
aliases
GCA_003041875.1; PZGX01
country
Canada
continent
North America
region
Ontario
year
2008
sex
female
disease
mastitis
source
animal
detailed source
Bos taurus, herd 216
bioproject accession
PRJNA342349 www.ebi.ac.uk
biosample accession
SAMN06173139 www.ebi.ac.uk
rMLST database accession
287941
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
8 updates show details
date entered
2020-11-13
datestamp
2021-02-12

Sequence bin

contigs
329
total length
2,669,409 bp
max length
58,524 bp
mean length
8,114 bp
N50
17,347
L50
45
N90
4,073
L90
163
N95
2,393
L95
206
%GC
32.46
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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