Full information on isolate i1 (id:107)

Provenance/primary metadata

id
107
isolate
i1
aliases
GCA_002407445.1; NXFX01
country
Denmark
continent
Europe
year
2017
disease
unknown
source
animal
detailed source
Stegodyphus dumicola
bioproject accession
PRJNA412144 www.ebi.ac.uk
biosample accession
SAMN07701646 www.ebi.ac.uk
rMLST database accession
253831
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
8
total length
2,868,918 bp
max length
1,185,439 bp
mean length
358,615 bp
N50
671,126
L50
2
N90
306,682
L90
4
N95
142,809
L95
5
%GC
32.42
Ns
357
gaps
2
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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