Full information on isolate LCHXa (id:106)

Provenance/primary metadata

id
106
isolate
LCHXa
aliases
GCA_002091355.1; NADO01
country
Chile
continent
South America
region
Laguna Chaxa
year
2014
disease
unknown
source
environmental
detailed source
water sample
bioproject accession
PRJNA379742 www.ebi.ac.uk
biosample accession
SAMN06619311; SRS4073029 www.ebi.ac.uk
rMLST database accession
246537
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
6 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
34
total length
3,013,090 bp
max length
1,194,484 bp
mean length
88,621 bp
N50
400,085
L50
2
N90
111,170
L90
8
N95
93,012
L95
9
%GC
32.33
Ns
4
gaps
4
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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