Full information on isolate RSA37 (id:101)

Provenance/primary metadata

id
101
isolate
RSA37
aliases
GCA_001476585.1; LDTQ01
country
India
continent
Asia
year
2013
disease
unknown
source
food
detailed source
Oryza sativa
bioproject accession
PRJNA278197 www.ebi.ac.uk
biosample accession
SAMN03401361 www.ebi.ac.uk
rMLST database accession
186718
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
72
total length
2,890,421 bp
max length
198,345 bp
mean length
40,145 bp
N50
81,742
L50
11
N90
29,717
L90
34
N95
15,546
L95
41
%GC
32.39
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

Tools

Export:
Analysis: