Full information on isolate NS53 (id:100)

Provenance/primary metadata

id
100
isolate
NS53
aliases
GCA_001476575.1; LDTP01
country
India
continent
Asia
year
2013
disease
unknown
source
food
detailed source
Oryza sativa
bioproject accession
PRJNA278418 www.ebi.ac.uk
biosample accession
SAMN03401358 www.ebi.ac.uk
rMLST database accession
186717
sender
Keith Jolley, University of Oxford, UK
curator
Michael Szostak, Institute of Microbiology, Department of Pathobiology, University of Veterinary Medicine Vienna, Veterinaerplatz 1, A-1210 Vienna, Austria (E-mail: michael.szostak@vetmeduni.ac.at)
update history
5 updates show details
date entered
2020-11-13
datestamp
2020-11-23

Sequence bin

contigs
155
total length
2,896,782 bp
max length
146,704 bp
mean length
18,689 bp
N50
53,334
L50
18
N90
16,195
L90
56
N95
6,539
L95
69
%GC
32.48
Ns
0
gaps
0
loci tagged
7

Show sequence bin

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Mammaliicoccus sciuri Bacillota > Bacilli > Bacillales > Staphylococcaceae > Mammaliicoccus > Mammaliicoccus sciuri 100%

Analysis performed: 2023-03-10

Schemes and loci

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