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Full information on isolate L. borgpetersenii. UI 09931 (id:866)

Provenance/meta data

id
866
isolate
L. borgpetersenii. UI 09931
aliases
AHNP02; GCA_000244255.3; PRJNA199752; PRJNA74113; SAMN02436592
country
Thailand
continent
Asia
host
human
isolation
yes
species
Leptospira borgpetersenii
serovar
Javanica
rMLST database accession
71174
sender
Keith Jolley, University of Oxford, UK
curator
Auto Tagger
update history
15 updates show details
date entered
2018-05-09
datestamp
2020-02-12

Publication (1)

  • Fouts DE, Matthias MA, Adhikarla H, Adler B, Amorim-Santos L, Berg DE, Bulach D, Buschiazzo A, Chang YF, Galloway RL, Haake DA, Haft DH, Hartskeerl R, Ko AI, Levett PN, Matsunaga J, Mechaly AE, Monk JM, Nascimento AL, Nelson KE, Palsson B, Peacock SJ, Picardeau M, Ricaldi JN, Thaipandungpanit J, Wunder EA, Yang XF, Zhang JJ, Vinetz JM (2016). What Makes a Bacterial Species Pathogenic?:Comparative Genomic Analysis of the Genus Leptospira. PLoS Negl Trop Dis 10:e0004403

Sequence bin

contigs
15
total length
3,894,772 bp
max length
1,165,875 bp
mean length
259,652 bp
N50 contig number
3
N50 length (L50)
468,398
N90 contig number
7
N90 length (L90)
169,478
N95 contig number
9
N95 length (L95)
75,776
loci tagged
1,643
detailed breakdown
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