Full information on isolate 12BKT052990 (id:7)

Provenance/primary metadata

id
7
isolate
12BKT052990
source
Sheep
country
Sweden
continent
Europe
location
Kronobergs län
collection institute
SVA
collected year
2012
year
2012
disease state
footrot
sample
swab
phenotype
benign
serogroup by sequence
A
ENA accession
ERR506927 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
5 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
62
total length
1,370,608 bp
max length
241,623 bp
mean length
22,107 bp
N50 contig number
4
N50 length (L50)
183,786
N90 contig number
10
N90 length (L90)
27,413
N95 contig number
12
N95 length (L95)
22,496
loci tagged
743

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