Full information on isolate 11BKT051780 (id:6)

Provenance/primary metadata

id
6
isolate
11BKT051780
source
Sheep
country
Sweden
continent
Europe
location
Sodermanlands län
collection institute
SVA
collected year
2011
year
2011
disease state
footrot
sample
swab
phenotype
benign
serogroup by sequence
B
ENA accession
ERR506926 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
6 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
35
total length
1,354,717 bp
max length
252,109 bp
mean length
38,707 bp
N50 contig number
4
N50 length (L50)
144,396
N90 contig number
12
N90 length (L90)
36,535
N95 contig number
15
N95 length (L95)
20,476
loci tagged
721

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