Full information on isolate 12BKT031675 (id:4)
Provenance/primary metadata
- id
- 4
- isolate
- 12BKT031675
- source
- Cattle
- country
- Sweden
- continent
- Europe
- location
- Gotlands län
- collection institute
- SVA
- collected year
- 2012
- year
- 2012
- disease state
- footrot
- sample
- swab
- phenotype
- benign
- serogroup by sequence
- H
- ENA accession
- ERR506924 www.ebi.ac.uk
- sender
- Adam Blanchard, University of Nottingham
- curator
- Auto Tagger
- update history
- 5 updates show details
- date entered
- 2017-09-05
- datestamp
- 2018-07-19
Publications (2)
- Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
- Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14
Sequence bin
- contigs
- 134
- total length
- 1,409,009 bp
- max length
- 82,655 bp
- mean length
- 10,515 bp
- N50 contig number
- 18
- N50 length (L50)
- 27,083
- N90 contig number
- 52
- N90 length (L90)
- 7,104
- N95 contig number
- 66
- N95 length (L95)
- 3,026
- loci tagged
- 694
Schemes and loci
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