Full information on isolate 12BKT031675 (id:4)

Provenance/primary metadata

id
4
isolate
12BKT031675
source
Cattle
country
Sweden
continent
Europe
location
Gotlands län
collection institute
SVA
collected year
2012
year
2012
disease state
footrot
sample
swab
phenotype
benign
serogroup by sequence
H
ENA accession
ERR506924 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
5 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
134
total length
1,409,009 bp
max length
82,655 bp
mean length
10,515 bp
N50 contig number
18
N50 length (L50)
27,083
N90 contig number
52
N90 length (L90)
7,104
N95 contig number
66
N95 length (L95)
3,026
loci tagged
694

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