Full information on isolate AC3466 (id:25)

Provenance/primary metadata

id
25
isolate
AC3466
source
Sheep
country
Australia
continent
Oceania
location
Western Australia
collection institute
Monash
collected year
1991
year
1991
disease state
footrot
sample
swab
phenotype
virulent
serogroup by sequence
B
ENA accession
ERR506945 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
5 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
18
total length
1,393,458 bp
max length
583,967 bp
mean length
77,415 bp
N50 contig number
2
N50 length (L50)
241,398
N90 contig number
7
N90 length (L90)
50,035
N95 contig number
9
N95 length (L95)
31,001
loci tagged
809

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