Full information on isolate VCS1172 (id:22)

Provenance/primary metadata

id
22
isolate
VCS1172
source
Sheep
country
Australia
continent
Oceania
region
Moss Vale
location
New South Wales
collection institute
Monash
collected year
1978
year
1978
disease state
footrot
sample
swab
phenotype
virulent
serogroup by sequence
D
ENA accession
ERR506942 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
Auto Tagger
update history
4 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
399
total length
1,342,552 bp
max length
29,451 bp
mean length
3,365 bp
N50 contig number
59
N50 length (L50)
6,381
N90 contig number
231
N90 length (L90)
1,559
N95 contig number
285
N95 length (L95)
957
loci tagged
720

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