Full information on isolate CS310 (id:19)

Provenance/primary metadata

id
19
isolate
CS310
source
Sheep
country
Australia
continent
Oceania
location
New South Wales
collection institute
Monash
collected year
1978
year
1978
disease state
footrot
sample
swab
phenotype
benign
serogroup by sequence
G
ENA accession
ERR506939 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
5 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
18
total length
1,336,383 bp
max length
369,551 bp
mean length
74,244 bp
N50 contig number
3
N50 length (L50)
237,210
N90 contig number
7
N90 length (L90)
64,050
N95 contig number
8
N95 length (L95)
43,130
loci tagged
732

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