Full information on isolate CS287 (id:18)

Provenance/primary metadata

id
18
isolate
CS287
source
Sheep
country
Australia
continent
Oceania
location
Victoria
collection institute
Monash
collected year
1977
year
1977
disease state
footrot
sample
swab
phenotype
benign
serogroup by sequence
G
ENA accession
ERR506938 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
5 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
16
total length
1,338,993 bp
max length
463,579 bp
mean length
83,688 bp
N50 contig number
2
N50 length (L50)
242,415
N90 contig number
7
N90 length (L90)
54,859
N95 contig number
8
N95 length (L95)
38,908
loci tagged
737

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