Full information on isolate 12BKT066722 (id:13)

Provenance/primary metadata

id
13
isolate
12BKT066722
source
Sheep
country
Sweden
continent
Europe
location
Dalarnas län
collection institute
SVA
collected year
2012
year
2012
disease state
footrot
sample
swab
phenotype
virulent
serogroup by sequence
G
ENA accession
ERR506933 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
4 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
48
total length
1,346,476 bp
max length
252,730 bp
mean length
28,052 bp
N50 contig number
4
N50 length (L50)
138,446
N90 contig number
10
N90 length (L90)
63,813
N95 contig number
12
N95 length (L95)
18,267
loci tagged
921

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