Full information on isolate 08BKT063297 (id:12)
Provenance/primary metadata
- id
- 12
- isolate
- 08BKT063297
- source
- Sheep
- country
- Sweden
- continent
- Europe
- location
- Skåne län
- collection institute
- SVA
- collected year
- 2008
- year
- 2008
- disease state
- footrot
- sample
- swab
- phenotype
- virulent
- serogroup by sequence
- G
- ENA accession
- ERR506932 www.ebi.ac.uk
- sender
- Adam Blanchard, University of Nottingham
- curator
- Auto Tagger
- update history
- 4 updates show details
- date entered
- 2017-09-05
- datestamp
- 2018-07-19
Publications (2)
- Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
- Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14
Sequence bin
- contigs
- 42
- total length
- 1,345,833 bp
- max length
- 313,768 bp
- mean length
- 32,044 bp
- N50 contig number
- 3
- N50 length (L50)
- 225,848
- N90 contig number
- 7
- N90 length (L90)
- 61,139
- N95 contig number
- 8
- N95 length (L95)
- 45,915
- loci tagged
- 923
Schemes and loci
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