Full information on isolate 08BKT063297 (id:12)

Provenance/primary metadata

id
12
isolate
08BKT063297
source
Sheep
country
Sweden
continent
Europe
location
Skåne län
collection institute
SVA
collected year
2008
year
2008
disease state
footrot
sample
swab
phenotype
virulent
serogroup by sequence
G
ENA accession
ERR506932 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
4 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
42
total length
1,345,833 bp
max length
313,768 bp
mean length
32,044 bp
N50 contig number
3
N50 length (L50)
225,848
N90 contig number
7
N90 length (L90)
61,139
N95 contig number
8
N95 length (L95)
45,915
loci tagged
923

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