Full information on isolate 11BKT062646 (id:11)

Provenance/primary metadata

id
11
isolate
11BKT062646
source
Sheep
country
Sweden
continent
Europe
location
Dalarnas län
collection institute
SVA
collected year
2011
year
2011
disease state
footrot
sample
swab
phenotype
virulent
serogroup by sequence
G
ENA accession
ERR506931 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
Auto Tagger
update history
4 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
57
total length
1,346,610 bp
max length
190,005 bp
mean length
23,625 bp
N50 contig number
5
N50 length (L50)
102,943
N90 contig number
16
N90 length (L90)
12,033
N95 contig number
22
N95 length (L95)
9,269
loci tagged
920

Show sequence bin

Schemes and loci

Navigate and select schemes within tree to display allele designations

Tools

Export:
Analysis: