Full information on isolate AN363-05 (id:1)

Provenance/primary metadata

id
1
isolate
AN363-05
source
Sheep
country
Sweden
continent
Europe
location
Västra Götalands län
collection institute
SVA
collected year
2005
year
2005
disease state
footrot
sample
swab
phenotype
virulent
serogroup by sequence
B
ENA accession
ERR506921 www.ebi.ac.uk
sender
Adam Blanchard, University of Nottingham
curator
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update history
5 updates show details
date entered
2017-09-05
datestamp
2018-07-19

Publications (2)

  • Blanchard AM, Jolley KA, Maiden MCJ, Coffey TJ, Maboni G, Staley CE, Bollard NJ, Warry A, Emes RD, Davies PL, Tötemeyer S (2018). The Applied Development of a Tiered Multilocus Sequence Typing (MLST) Scheme forDichelobacter nodosus. Front Microbiol 9:551
  • Kennan RM, Gilhuus M, Frosth S, Seemann T, Dhungyel OP, Whittington RJ, Boyce JD, Powell DR, Aspán A, Jørgensen HJ, Bulach DM, Rood JI (2014). Genomic evidence for a globally distributed, bimodal population in the ovine footrot pathogen Dichelobacter nodosus. MBio 5:e01821-14

Sequence bin

contigs
38
total length
1,372,467 bp
max length
380,173 bp
mean length
36,118 bp
N50 contig number
2
N50 length (L50)
340,822
N90 contig number
7
N90 length (L90)
61,864
N95 contig number
9
N95 length (L95)
27,098
loci tagged
920

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