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Full information on isolate OXC11883 (id:78106)

Projects

This isolate is a member of the following project:

Oxfordshire FSA Human Surveillance
This isolate is part of the Food Standards Agency funded project for enhanced molecular-based (MLST/wgMLST) surveillance and source attribution of human Campylobacter, in the UK.

Provenance/meta data

id
78106
isolate
OXC11883
alias
RL18005154
country
UK
continent
Europe
region
Oxfordshire
year
2018
month
9
received date
2018-09-03
source
human stool
species
Campylobacter jejuni
sender
Anais Painset, PHE, Colindale, London
curator
Alison Cody, Department of Zoology, Oxford University, UK (E-mail: Alison.Cody@zoo.ox.ac.uk)
update history
7 updates show details
date entered
2018-12-05
datestamp
2019-02-14

Sequence bin

contigs
30
total length
1,687,415 bp
max length
262,536 bp
mean length
56,248 bp
N50 contig number
5
N50 length (L50)
148,428
N90 contig number
10
N90 length (L90)
92,716
N95 contig number
12
N95 length (L95)
27,868
loci tagged
1,542
detailed breakdown
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Schemes and loci

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Analysis: