Full information on isolate RM4661 (id:2473)
Provenance/primary metadata
- id
- 2473
- isolate
- RM4661
- alias
- NADC 9175
- country
- USA
- continent
- North America
- year
- 2003
- source
- turkey
- species
- Campylobacter coli
- sender
- William Miller, Produce Safety and Microbiology Research Unit, USDA, USA
- curator
- Auto Tagger
- update history
- 55 updates show details
- date entered
- 2005-01-17
- datestamp
- 2022-07-22
Annotation quality metrics
| Scheme | Scheme loci | Designated loci | Annotation | |
|---|---|---|---|---|
| Score | Status | |||
| MLST | 7 | 7 | 100 | |
| Ribosomal MLST | 53 | 53 | 100 | |
| C. jejuni / C. coli cgMLST v1.0 | 1343 | 1261 | 93 | |
Analysis
rMLST species identification
| Rank | Taxon | Taxonomy | Support | Matches |
|---|---|---|---|---|
| SPECIES | Campylobacter coli | Proteobacteria > Epsilonproteobacteria > Campylobacterales > Campylobacteraceae > Campylobacter > Campylobacter coli | 100% |
Analysis performed: 2023-01-11
Schemes and loci
Navigate and select schemes within tree to display allele designations
Tools
Export:
Analysis: