Full information on isolate MK1900 (id:98)

Provenance/primary metadata

id
98
isolate
MK1900
alias
16
country
Philippines
continent
Asia
year
1990
species
Burkholderia pseudomallei
source
animal
animal source
monkey
sender
Tyrone Pitt, Central Public Health Laboratory, London, UK
curator
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update history
6 updates show details
date entered
2016-02-01
datestamp
2022-01-12

Publication (1)

  • Godoy D, Randle G, Simpson AJ, Aanensen DM, Pitt TL, Kinoshita R, Spratt BG (2003). Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei. J Clin Microbiol 41:2068-79

Sequence bin

contigs
110
total length
7,103,478 bp
max length
476,735 bp
mean length
64,578 bp
N50
144,951
L50
16
N90
45,003
L90
48
N95
21,676
L95
59
%GC
68.24
Ns
479
gaps
10
loci tagged
5,602

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
cgMLST4090408099

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Burkholderia pseudomallei Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia pseudomallei 100%

Analysis performed: 2022-11-24

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

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Tools

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