Full information on isolate Hainan 106 (id:84)

Provenance/primary metadata

id
84
isolate
Hainan 106
alias
Hainan106
country
China
continent
Asia
species
Burkholderia pseudomallei
source
unknown
sender
Tyrone Pitt, Central Public Health Laboratory, London, UK
curator
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update history
5 updates show details
date entered
2016-02-01
datestamp
2022-01-12

Publication (1)

  • Godoy D, Randle G, Simpson AJ, Aanensen DM, Pitt TL, Kinoshita R, Spratt BG (2003). Multilocus sequence typing and evolutionary relationships among the causative agents of melioidosis and glanders, Burkholderia pseudomallei and Burkholderia mallei. J Clin Microbiol 41:2068-79

Sequence bin

contigs
139
total length
7,026,197 bp
max length
332,621 bp
mean length
50,549 bp
N50
95,528
L50
21
N90
28,963
L90
72
N95
18,308
L95
88
%GC
68.13
Ns
1069
gaps
17
loci tagged
5,559

Show sequence bin

Annotation quality metrics

SchemeScheme lociDesignated lociAnnotation
ScoreStatus
MLST77100
Ribosomal MLST5353100
cgMLST4090406399

Analysis

rMLST species identification

RankTaxonTaxonomySupportMatches
SPECIES Burkholderia pseudomallei Proteobacteria > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia pseudomallei 100%

Analysis performed: 2022-11-24

Similar isolates (determined by classification schemes)

No similar isolates at any threshold. Show groups

Schemes and loci

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